Saturday, September 20, 2008

Non-genetic sex-determination systems

Many other sex-determination systems exist. In some species of reptiles, including alligators, some turtles, and the tuatara, sex is determined by the temperature at which the egg is incubated. Other species, such as some snails, practice sex change: adults start out male, then become female. In tropical clown fish, the dominant individual in a group becomes female while the other ones are male.
Some species have no sex-determination system. Earthworms
and some snails hermaphrodites; a few species of lizard, fish, and insect are all female and reproduce by parthenogenesis.
In some
arthropods, sex is determined by infection, as when Bacteria of the genus Wolbachia alter their sexuality; some species consist entirely of ZZ individuals, with sex determined by the presence of Wolbachia.
Reference:

Sex-determination system

Most sexual organisms have two sexes. Sex determination in animals, is often accompanied by chromosomal differences. In other cases, sex is determined by environmental variables (such as temperature).
XX/XY sex chromosomes
In the XY sex-determination system, females have two of the same kind of sex chromosome (XX), while males have two distinct sex chromosomes (XY). Some species (including humans) have a gene SRY on the Y chromosome that determines maleness; others (such as the fruit fly) use the presence of two X chromosomes to determine femaleness.
ZW sex chromosomes
The ZW sex-determination system is found in birds and some insects and other organisms. The ZW sex-determination system is reversed compared to the XY system: females have two different kinds of chromosomes (ZW), and males have two of the same kind of chromosomes (ZZ).
Haplodiploidy
Haplodiploidy is found in insects belonging to Hymenoptera, such as ants and bees. Unfertilized eggs develop into haploid individuals, which are the males, while diploid individuals are generally female.
Referance:

Wednesday, September 17, 2008

Mutation

staff.jccc.net/.../mutations/mutation.html

Mitochondrial Inheritance


Traditional inheritance views the nucleus as the central repository of genetic information and meiosis as the principal determinant of the segregation of traits in families. However, the existence of another genome, the mitochondrial genome, in all cells introduces another twist of biology leading to nontraditional inheritance.
Mitochondria are organelles that provide much of the energy cells use for the work they do. Most biologists now believe that these structures evolved from microorganisms that established symbiotic relationships with the ancestors of animal cells very early in the history of life on this planet. Selection for metabolic advantages gained through symbiosis explains how it has come to be that mitochondria contain their own DNA that codes for 13 of their proteins along with ribosomal and transfer RNA that specifically help express mitochondrial series.
As with any form of DNA, mitochondrial DNA (mtDNA) sequences are susceptible to mutation In fact, there is evidence that mitochondrial sequences may mutate at rates 3 to 5 times greater than nuclear sequences. The consequences of mitochondrial mutations, however, may be very different from those that occur in nuclear DNA. First, each cell contains about 100,000 mitochondria, each of which has 2 to 10 copies of its genome. The effect a mutation in mtDNA will have on a cell's function will therefore depend on the number of mutant organelles in a cell compared to the number of normal, or "wild type", present. In this respect, each cell is analogous to an organism in which somatic mutation can produce mosaicism (see above). Here the mixture of genotypes is termed heteroplasmy.
When cells divide, their mitochondria independently replicate and then distribute randomly into daughter cells. This leads to variable phenotypes within and among tissues ranging from non-viable cells (hence death of tissue), to energy generation dysfunction, to subthreshold changes (i.e. "silent" mutations) that do not affect overall cell function. What this means is that mitochondrial mutations may be variable in their clinical presentation, depending on their timing and prevalence.
The human mitochondrial genome, which contains 16,569 nucleotide pairs, has been completely mapped and sequenced. Interestingly, it uses a slightly different genetic code (sequence of nucleotide bases that specifies an amino acid) than that used by nuclear genes. Several mutations, both single base changes (or point mutations) and structural changes (deletions) have been described which produce clinical disorders.
A number of specific disorders have been described where mitochondrial mutations are either inherited or occur early enough in development to dominate most cells. These disorders characteristically affect muscle and nervous tissue, particularly the optic tracks. Among these conditions are Leber's Hereditary Optic Neuropathv (LHON), which usually presents with onset of symptoms after puberty; Kearns-Sayre syndrome and chronic progressive external ophthalmoplegia (CPEO), which both result in paralysis of external, but not internal, eye muscles; myoclonic epilepsy with ragged red fibers (MERRF), which presents at various ages; and mitochondrial myopathy, encephalopathy, lactic acidosis with stroke-like episodes (MELAS), which evolves during infancy.
Mitochondria are passed from generation to generation only through maternal egg cells where they are abundant. Those present in sperm are concentrated in the tail and do not contribute to the compliment of the fertilized zygote. Molecular genetic tracking of polymorphic or variable regions through families and even across the millenia of human evolution confirm maternal inheritance of mitochondrial DNA.
Maternal inheritance looks very much like mendelian autosomal dominant inheritance with two important exceptions. First, all maternal offspring are usually affected. Even in highly penetrant dominant disorders only 50% of offspring are expected to be affected. Secondly, mitochondrially-inherited traits are never passed through a male. Males are as likely to be affected as females, but their offspring are not at risk.
Although mitochondrial inheritance looks easy to identify in a pedigree like the one in Figure 3, it must be remembered that phenotypic variability is a hallmark for these disorders, especially in cases where there is heteroplasmy. Therefore, a family history where some individuals present with strokes, others with muscle weakness, and still others with psychiatric or ophthalmologic complaints might not be immediately recognizable as one expressing a single mitochondrial mutation. This is an important point because while the human mitochondrial genome has been sequenced, a complete spectrum of its viable mutations is far from assembled.
With frequencies approaching 1:50,000 LHON and other mitochondrial disorders would appear to be rare. It is likely, however, that since mitochondrial mutations are frequent, there are many new phenotypes yet to be discovered. In aggregate, clinically significant mutations may be eventually shown to be common. Indeed, it has been proposed that accumulating mitochondrial mutations contribute significantly to aging.

A final point about mitochondrial inheritance that needs to be stressed is that most of the proteins contributing to mitochondrial structure and function are encoded by nuclear genes and their mutations therefore segregate as mendelian traits. Thus, a clear distinction needs to be kept between mitochondrial disorders, most of which are inherited as recessive traits, and mitochondrial inheritance, which is concerned only with those mutations occurring in mitochondrial DNA. Disorders of mitochondrial function inherited by either classical mendelian or mitochondrial inheritance may have overlapping features.
Referance:

Multifactorial Inheritance


The most common cause of genetic disorders is multifactorial or polygenic inheritance. Traits that are due to the combined effects of multiple genes are polygenic (many genes). When environmental factors also play a role in the development of a trait, the term multifactorial is used to refer to the additive effects of many genetic and environmental factors. Expression of these traits may follow a normal, or "bell-shaped," curve. Examples of multifactorial traits include cleft lip and palate, congenital hip dislocation, schizophrenia, diabetes and neural tube defects such as spina bifida.
Multifactorial conditions tend to run in families, but the pattern of inheritance is not as predictable as with single gene disorders. The chance of recurrence is also less than the risk for single gene disorders. The degree of risk of a multifactorial disorder occurring in relatives is related to the number of genes they share in common with the affected individual. The closer the degree of relationship, the more genes in common. The degree of risk also increases with the degree of severity of the disorder.
Although multifactorial conditions run in families, the risk is generally less than the 25% or 50% seen in Mendelian conditions. Identical twins who are exactly alike genetically, do not always have the same condition when inheritance is multifactorial. This indicates that there are nongenetic factors that also play a role in the expression of multifactorial traits. For instance, the risk of coronary heart disease increases with smoking or obesity. The risk of emphysema in individuals with alpha-1-antitrypsin deficiency increases greatly with smoking. Maternal ingestion of valproic acid, a medication for seizures, increases the risk of spina bifida. Maternal alcohol abuse or uncontrolled diabetes increases the risk of having a child with a congenital heart defect.
Empiric risks are used to predict the recurrence of a multifactorial disorder. This is a risk that is based on epidemiologic and population studies and on mathematical models.
For many multifactorial or polygenic disorders, parents who have had one affected child have a 3-5% risk in future pregnancies of having another affected child. Affected individuals have a similar risk in future progeny. More distant relatives, however, have a lower recurrence risk.
In conditions inherited in a multifactorial fashion, the risk may depend on the sex of the affected individual. For example, pyloric stenosis is a multifactorial disorder that occurs five times more frequently in males than in females. If a female child has pyloric stenosis, her risk and her parent's risk of having another affected child would be higher than if a male child has pyloric stenosis. Occurrence in a female suggests a greater genetic liability; presumably more abnormal genes are segregating in the family.

Referance:
http://www.usd.edu/med/som/genetics/curriculum/1GMULTI5.htm

Monday, September 15, 2008